Publications

2017

Ahnen L, Stachel H, Kleiser S, Hagmann C, Jiang J, Kalyanov A, Lindner S, Wolf M and Sanchez S (2017) Development and Validation of a Sensor Prototype for Near-Infrared Imaging of the Newborn Brain. Adv. Exp. Med. Biol: 977:163-168. doi: 10.1007/978-3-319-55231-6_22.

 

Becker R, Buck A, Casella C, Dissertori G, Fischer J, Howard A, Ito M, Khateri P, Lustermann W, Oliver JF, Röser U, Warnock G, Weber B (2017) The SAFIR experiment: Concept, status and perspectives. NIMA 845: 648-651. doi: 10.1016/j.nima.2016.05.037.

 

Diaconescu AO, Mathys C, Weber LAE, Kasper L, Mauer J, Stephan KE (2017) Hierarchical prediction errors in midbrain and septum during social learning. Soc Cogn Affect Neurosci 12: 618-634. doi: 10.1093/scan/nsw171.

 

Eshmuminov D, Tschuor C, Raptis DA, Boss A, Wurnig MC, Sergeant G, Schadde E, Clavien PA (2017) Rapid liver volume increase induced by associating liver partition with portal vein ligation for staged hepatectomy (ALPPS): Is it edema, steatosis, or true proliferation? Surgery:161(6):1549-1552. doi: 10.1016/j.surg.2017.01.005.

 

Esipova TV, Rivera-Jacquez HJ, Weber B, Masunov AE, Vinogradov SA (2017) Stabilizing g‐states in centrosymmetric tetrapyrroles: Two-photon-absorbing porphyrins with bright phosphorescence. J Phys Chem 121:6243-6255. doi: 10.1021/acs.jpca.7b04333.

 

Fuetterer M, Busch J, Peereboom SM, von Deuster C, Wissmann L, Lipiski M, Fleischmann T, Cesarovic N, Stoeck CT, Kozerke S (2017) Hyperpolarized 13C urea myocardial first-pass perfusion imaging using velocity-selective excitation. J Cardiovasc Magn Reson. 19:46. doi: 10.1186/s12968-017-0364-4.

 

Fuetterer M, Stoeck CT, Kozerke S (2017) Second-order motion compensated PRESS for cardiac spectroscopy. Magn Reson Med. 77:57-64. doi: 10.1002/mrm.26099.

 

Gabriel SS, Belge H, Gassama A, Debaix H, Luciani A, Fehr T, Devuyst O (2017) Bone marrow transplantation improves proximal tubule dysfunction in a mouse model of Dent disease. Kidney Int.:91(4):842-855 doi: 10.1016/j.kint.2016.11.016.

 

Hall AM, Schuh CD, Haenni D. New frontiers in intravital microscopy of the kidney (2017) Curr Opin Nephrol Hypertens. May;26(3):172-178. doi: 10.1097/MNH.0000000000000313.

 

Iglesias S, Tomiello S, Schneebeli M, Stephan KE (2017) Models of neuromodulation for computational psychiatry. Wiley Interdisciplinary Reviews: Cognitive Science 8:e1420. doi: 10.1002/wcs.1420.

 

Lehmann S, te Boeckhorst VAM, Odenthal J, van Helvert S, Ilina O, Grenman R, Rudin M, Friedl P (2017) Hypoxia/HIF-1 induced epithelial-to-mesenchymal transition and amoeboid dissemination of epithelial cancer cells. Curr Biol  27: 1-9, doi: 10.1016/j.cub.2016.11.057,

 

Meletta R, Slavik R, Mu L, Rancic Z, Borel N, Schibli R, Ametamey SM, Krämer SD, and Müller Herde A. Cannabinoid receptor type 2 (CB2) as one of the candidate genes in human carotid plaque imaging: evaluation of the novel radiotracer [11C]Rs-016 targeting CB2 in atherosclerosis (2017) Nucl Med Biol 47: 31-43. doi: 10.1016/j.nucmedbio.2017.01.001.

 

Meletta R, Steier L, Borel N, Mu L, Keller C, Chiotellis A, Russo E, Halin C, Ametamey SM, Schibli R, Krämer SD, Müller Herde A. CD80 is upregulated in a mouse model with shear stress-induced atherosclerosis and allows for evaluating CD80-targeting PET tracers (2017) Mol Imaging Biol 19: 90-99. doi: 10.1007/s11307-016-0987-0.

 

Petzschner FH, Weber LAE, Gard T, Stephan KE (2017) Computational Psychosomatics and Computational Psychiatry: Toward a joint framework for differential diagnosis. Biol Psychiatry 82:421-430. doi: 10.1016/j.biopsych.2017.05.012.

 

Quevenco FC, Preti MG, van Bergen JM, Hua J, Wyss M, Li X, Schreiner SJ, Steininger SC, Meyer R, Meier IB, Brickman AM, Leh SE, Gietl AF, Buck A, Nitsch RM, Pruessmann KP, van Zijl PC, Hock C, Van De Ville D, Unschuld PG (2017) Memory performance-related dynamic brain connectivity indicates pathological burden and genetic risk for Alzheimer's disease Alzheimers Res Ther 9:24. doi: 10.1186/s13195-017-0249-7.

 

Schmid F, Tsai P, Kleinfeld D, Jenny P, Weber B. (2017) Depth-dependent flow and pressure characteristics in cortical microvascular networks. PLoS Computational Biology 13: e1005392. doi: 10.1371/journal.pcbi.1005392.

 

Stephan KE, Schlagenhauf F, Huys QJM, Raman S, Aponte EA, Brodersen KH, Rigoux L, Moran RJ, Daunizeau J, Dolan RJ, Friston KJ, Heinz A (2017) Computational neuroimaging strategies for single patient predictions.  NeuroImage 145: 180-199. doi: 10.1016/j.neuroimage.2016.06.038.

 

Warnock G, Sommerauer M, Mu L, Pla Gonzalez G, Geistlich S, Treyer V, Schibli R, Buck A, Krämer SD, Ametamey SM (2017) A first-in-man PET study of [18F]PSS232, a fluorinated ABP688 derivative for imaging metabotropic glutamate receptor subtype 5. Eur J Nucl Med Mol Imaging. doi: 10.1007/s00259-017-3879-x.

 

Warnock G, Özbay PS, Kuhn FP, Nanz D, Buck A, Boss A, Rossi C. Reduction of BOLD interference in pseudo-continuous arterial spin labeling: towards quantitative fMRI (2017) J Cereb Blood Flow Metab.:1:271678X17704785. doi: 10.1177/0271678X17704785.

2016

Freund P, Friston K, Thompson A, Stephan KE, Ashburner J, Bach DR, Nagy Z, Helms H, Draganski B, Mohammadi S, Schwab ME, Curt A, Weiskopf N (2016) Embodied Neurology: An integrative framework. Brain 139: 1855-1861 Brain

Hall AM and Schuh CD (2016) Mitochondrial targeted therapies in acute kidney injury. Current Opinion in Nephrology and Hypertension 25(4):355-62. Current Opinion in Nephrology and Hypertension

Iglesias S, Tomiello S, Schneebeli M, Stephan KE (2016) Models of neuromodulation for computational psychiatry. Wiley Interdiscip Rev Cogn Sci. Epub ahead of print. Wiley Interdiscip Rev Cogn Sci.

Luciani A, Sirac C, Terryn S, Javaugue V, Prange JA, Bender S, Bonaud A, Cogné M, Aucouturier P, Ronco P, Bridoux F, Devuyst O (2016) Impaired Lysosomal Function Underlies Monoclonal Light Chain-Associated Renal Fanconi Syndrome. J Am Soc Nephrol 27(7):2049-61 J Am Soc Nephrol

Marcon M, Keller D, Wurnig MC, Eberhardt C, Weiger M, Eberli D, Boss A (2016) Separation of collagen-bound and porous bone water transverse relaxation in mice: proposal of a multi-step approach. NMR Biomed. 7:866-72 NMR Biomed

Marcon M, Keller D, Wurnig MC, Weiger M, Kenkel D, Eberhardt C, Eberli D, Boss A (2016) Separation of collagen-bound and porous bone-water longitudinal relaxation in mice using a segmented inversion recovery zero-echo-time sequence. Magn Reson Med. 2016 May Magn Reson Med

Marcon M, Weiger M, Keller D, Wurnig MC, Eberhardt C, Eberli D, Boss A. Magnetization transfer imaging of cortical bone in vivo using a zero echo time sequence in mice at 4.7 T: a feasibility study. MAGMA. 6:853-862 MAGMA

Marshall L*, Mathys C*, Ruge D, de Berker AO, Dayan P, Stephan KE, Bestmann S (2016) Pharmacological Fingerprints of Contextual Uncertainty. PLoS Biology 14 PLoS Biology

Meletta R, Müller Herde A, Dennler P, Fischer E, Schibli R, Krämer SD (2016) Preclinical imaging of the co-stimulatory molecules CD80 and CD86 with indium-111-labeled belatacept in atherosclerosis. EJNMMI Res. 6:1 EJNMMI Res

Meletta R, Steier L, Borel N, Mu L, Keller C, Chiotellis A , Russo E, Halin C, Ametamey SM, Schibli R, Krämer SD, Müller Herde A (2016) CD80 Is Upregulated in a Mouse Model with Shear Stress-Induced Atherosclerosis and Allows for Evaluating CD80-Targeting PET Tracers. Mol Imaging Biol. Epub ahead of print Mol Imaging Biol

Prange JA, Bieri M, Segerer S, Burger C, Kaech A, Moritz W, Devuyst O (2016) Human proximal tubule cells form functional microtissues. Pflugers Arch. 468(4):739-50 Pflugers Arch

Schreiner SJ, Kirchner T, Wyss M, Van Bergen JM, Quevenco FC, Steininger SC, Griffith EY, Meier I, Michels L, Gietl AF, Leh SE, Brickman AM, Hock C, Nitsch RM, Pruessmann KP, Henning A, Unschuld PG (2016) Low episodic memory performance in cognitively normal elderly subjects is associated with increased posterior cingulate gray matter N-acetylaspartate: a 1H MRSI study at 7 Tesla. Neurobiology of Aging. 48:195-203 Neurobiology of Aging

Schuh CD, Haenni D, Craigie E, Ziegler U, Weber B, Devuyst O and Hall AM (2016) Long wavelength multiphoton excitation is advantageous for intravital kidney imaging. Kidney International 89(3):712-9 Kidney International

Stephan KE, Manjaly ZM, Mathys C, Weber LAE, Paliwal S, Gard T, Tittgemeyer M, Fleming S, Haker H, Seth A, Petzschner FH (2016) Allostatic Self-Efficacy: A Metacognitive Theory of Dyshomeostasis-Induced Fatigue and Depression. Frontiers in Human Neuroscience 10: 550 Frontiers in Human Neuroscience

van Bergen JM, Li X, Hua J, Schreiner SJ, Steininger SC, Quevenco FC, Wyss M, Gietl AF, Treyer V, Leh SE, Buck F, Nitsch RM, Pruessmann KP, van Zijl PC, Hock C, Unschuld PG (2016) Colocalization of cerebral iron with Amyloid beta in Mild Cognitive Impairment. Scientific Reports 17;6:35514 Scientific Reports

2015

Barros LF, Sierralta J, Weber B (2015) How doth the little busy bee: unexpected metabolism. Trends in Neuroscience 38, 1-2 Trends in Neurosciences

Gietl AF, Warnock G, Riese F et al. (2015) Regional cerebral blood flow estimated by early PiB uptake is reduced in mild cognitive impairment and associated with age in an amyloid-dependent manner. Neurobiol Aging Neurobiology of Aging

Lerchundi R, Fernández-Moncada I, Contreras-Baeza Y, Sotelo-Hitschfeld T, Maechler P, Wyss MT, Stobart J, Baeza-Lehnert F, Alegría K, Weber B, Barros LF (2015) NH4+ triggers the release of astrocytic lactate via mitochondrial pyruvate shunting. Proceedings of the National Academy of Sciences of the United States of America 112, 11090–11095 PNAS

Luciani A, Sirac C, Terryn S, Javaugue V, Prange JA, Bender S, Bonaud A, Cogné M, Aucouturier P, Ronco P, Bridoux F, Devuyst O (2015) Impaired Lysosomal Function Underlies Monoclonal Light Chain-Associated Renal Fanconi Syndrome. J Am Soc Nephrol. 2015 Nov 27. pii: ASN.2015050581. [Epub ahead of print] J Am Soc Nephrol

Maechler P, Wyss MT, Elsayed M, Stobart J, Gutierrez R, von Faber-Castell A, Kaelin V, Zuend M, Martín A, Romero-Gómez I, Baeza-Lehnert F, Lengacher S, Schneider BL, Aebischer P, Magistretti PJ, Barros LF, Weber B (2015) In vivo evidence for a lactate gradient from astrocytes to neurons. Cell Metabolism 23(1), 94-102 Cell Metabolism

Mata Pavia J, Scandini M, Lindner S, Wolf M (shared last author), Charbon E (2015) A 1×400 backside-illuminated SPAD sensor with 49.7 ps resolution, 30 pJ/Sample TDCs fabricated in 3D CMOS technology for near-infrared optical tomography. IEEE Journal of Solid State Circuits; 50(10), 2406-2418. IEEE Journal of Solid-State Circuits

Mayrhofer J, Haiss F, Haenni D, Weber S, Zuend M, Barrett M, Ferrari K, Maechler P, Saab A, Stobart J, Wyss M, Johannssen H, Osswald H, Palmer L, Revol V, Schuh CD, Urban C, Hall A, Larkum M, Rutz-Innerhofer E, Zeilhofer HU, Ziegler U, and Weber B (2015) Design and performance of an ultra-flexible two-photon microscope for in vivo research. Biomedical Optics Express 6(11), 4228-4237 Biomedical Optics Express

Mayrhofer J, Haiss F, Helmchen F, Weber B (2015) Sparse, reliable, and long-term stable representation of periodic whisker deflections in the mouse barrel cortex. NeuroImage 115, 52-63 NeuroImage

Meletta R., Borel N, Stolzmann P, Astolfo A, Klohs J, Stampanoni M, Rudin M, Schibli R, Krämer SD, Müller Herde A (2015) Ex vivo differential phase contrast and magnetic resonance imaging for characterization of human carotid atherosclerotic plaques, Int J Cardiovasc Imaging, 31, 1425-1434 Int J Cardiovasc Imaging

Meletta R, Müller Herde A, Chiotellis A, Isa M, Rancic Z, Borel N, Ametamey SM, Krämer SD, Schibli R (2015) Evaluation of the radiolabeled boronic acid-based FAP inhibitor MIP-1232 for atherosclerotic plaque imaging, Molecules, 20, 2081-2099 Molecules

O H-Ici D, Wespi P, Busch J, Wissmann L, Krajewski M, Weiss K, Sigfridsson A, Messroghli D, Kozerke S (2015) Hyperpolarized Metabolic MR Imaging of Acute Myocardial Changes and Recovery after Ischemia-Reperfusion in a Small-Animal Model. Radiology. 278(3), 742-51 Radiology

Prange JA, Bieri M, Segerer S, Burger C, Kaech A, Moritz W, Devuyst O (2015) Human proximal tubule cells form functional microtissues. Pflugers Arch. [Epub ahead of print] PMID: 26676951 Pflugers Arch.

Siwowska K, Müller C (2015) Preclinical development of small-molecular-weight folate-based radioconjugates: a pharmacological perspective. Q J Nucl Med Mol Imaging, 59(3), 269-86 Q J Nucl Med Mol Imaging

Stehli J. et al. 2015. First experience with single-source, dual-energy CCTA for monochromatic stent imaging. Eur. Heart J. Carciovasc. Imaging, 16:507-512 Eur. Heart J. Carciovasc. Imaging

Stephan KE, Iglesias S, Heinzle J, Diaconescu AO (2015) Translational Perspectives for Computational Neuroimaging.  Neuron 87, 716-732 Neuron


2014

Azzabi F, Rottmar M, Jovaisaite V, Rudin M, Sulser T, Boss A, Eberli D(2014) Viability, differentiation capacity and detectability of super-paramagnetic iron oxide labeled muscle precursor cells for magnetic-resonance imaging. Tissue engineering Part C, Methods.
Bickelhaupt S, Wurnig MC, Lesurtel M, Patak MA, Boss A(2014) Quantitative in vivo analysis of small bowel motility using MRI examinations in mice - proof of concept study. Laboratory animals.
Chuck NC, Azzabi Zouraq F, Rottmar M, Eberli D, Boss A (2014) MR Imaging Relaxometry Allows Noninvasive Characterization of in Vivo Differentiation of Muscle Precursor Cells. Radiology 140483
Gotschy A, Niemann M, Kozerke S, Luscher TF, Manka R (2014) Cardiovascular magnetic resonance for the assessment of coronary artery disease. International journal of cardiology.
Melloul E, Raptis DA, Boss A, Pfammater T, Tschuor C, Tian Y, Graf R, Clavien PA, Lesurtel M(2014) Small animal magnetic resonance imaging: an efficient tool to assess liver volume and intrahepatic vascular anatomy. The Journal of surgical research 187:458-465.
Muller A, Beck K, Rancic Z, Muller C, Fischer CR, Betzel T, Kaufmann PA, Schibli R, Kramer SD, Ametamey SM (2014) Imaging Atherosclerotic Plaque Inflammation via Folate Receptor Targeting Using a Novel 18F-Folate Radiotracer. Molecular imaging 13:1-11
Muller A, Kramer SD, Meletta R, Beck K, Selivanova SV, Rancic Z, Kaufmann PA, Vos B, Meding J, Stellfeld T, Heinrich TK, Bauser M, Hutter J, Dinkelborg LM, Schibli R, Ametamey SM (2014) Gene expression levels of matrix metalloproteinases in human atherosclerotic plaques and evaluation of radiolabeled inhibitors as imaging agents for plaque vulnerability. Nuclear medicine and biology.
Muller A, Mu L, Meletta R, Beck K, Rancic Z, Drandarov K, Kaufmann PA, Ametamey SM, Schibli R, Borel N, Kramer SD (2014) Towards non-invasive imaging of vulnerable atherosclerotic plaques by targeting co-stimulatory molecules. International journal of cardiology.
Muller C, Reber J, Haller S, Dorrer H, Koster U, Johnston K, Zhernosekov K, Turler A, Schibli R(2014) Folate receptor targeted alpha-therapy using terbium-149. Pharmaceuticals 7:353-365
Pavia JM, Wolf M, Charbon E (2014) Measurement and modeling of microlenses fabricated on single-photon avalanche diode arrays for fill factor recovery. Opt Express 22:4202-4213.
Pavia JM, Wolf M, Charbon E (2014) Single-Photon Avalanche Diode Imagers Applied to Near-Infrared Imaging, IEEE Journal of Selected topics in Quantum Electronics , vol.20, no.6,, Nov.-Dec. 2014.
Schreiner SJ, Liu X, Gietl AF, Wyss M, Steininger SC, Gruber E, Treyer V, Meier IB, Kalin AM, Leh SE, Buck A, Nitsch RM, Pruessmann KP, Hock C, Unschuld PG(2014) Regional Fluid-Attenuated Inversion Recovery (FLAIR) at 7 Tesla correlates with amyloid beta in hippocampus and brainstem of cognitively normal elderly subjects. Front Aging Neurosci 6:240.
Sigfridsson A, Weiss K, Wissmann L, Busch J, Krajewski M, Batel M, Batsios G, Ernst M, Kozerke S(2014) Hybrid multiband excitation multiecho acquisition for hyperpolarized C spectroscopic imaging. Magn Reson Med.
Steininger S, Liu X, Gietl A, Wyss M, Schreiner S, Gruber E, Treyer V, Kälin A, Leh-Seal S, Buck A, Nitsch RM, Prüssmann KP, Hock C, Unschuld PG(2014) Cortical Amyloid beta in cognitively normal elderly adults is associated with decreased network efficiency within the cerebro-cerebellar system. Front in Aging Neuroscience
Stephan KE, Mathys C (2014) Computational approaches to psychiatry. Curr Opin Neurobiol 25:85-92.
Weber B, Helmchen F (Eds.). Optical Imaging of Neocortical Dynamics (2014) Springer Protocols, Neuromethods Vol. 85, Walz W. (Series Editor). New York: Springer.
    
2013
Bosch OG, Rihm JS, Scheidegger M, Landolt HP, Stampfli P, Brakowski J, Esposito F, Rasch B, Seifritz E(2013) Sleep deprivation increases dorsal nexus connectivity to the dorsolateral prefrontal cortex in humans. Proc Natl Acad Sci U S A 110:19597-19602.
Fischer CR, Groehn V, Reber J, Schibli R, Ametamey SM, Muller C (2013) Improved PET imaging of tumors in mice using a novel (18) F-folate conjugate with an albumin-binding entity. Mol Imaging Biol 15:649-654.
Iglesias S, Mathys C, Brodersen KH, Kasper L, Piccirelli M, den Ouden HE, Stephan KE(2013) Hierarchical prediction errors in midbrain and basal forebrain during sensory learning. Neuron 80:519-530.
Melloul E, Raptis DA, Boss A, Pfammater T, Tschuor C, Tian Y, Graf R, Clavien PA, Lesurtel M(2013) Small animal magnetic resonance imaging: an efficient tool to assess liver volume and intrahepatic vascular anatomy. J Surg Res.
Morsbach F, Pfammatter T, Reiner CS, Fischer MA, Sah BR, Winklhofer S, Klotz E, Frauenfelder T, Knuth A, Seifert B, Schaefer N, Alkadhi H (2013) Computed tomographic perfusion imaging for the prediction of response and survival to transarterial radioembolization of liver metastases. Invest Radiol 48:787-794.
Muller C, Bunka M, Reber J, Fischer C, Zhernosekov K, Turler A, SchibliR (2013a) Promises of cyclotron-produced 44Sc as a diagnostic match for trivalent beta--emitters: in vitro and in vivo study of a 44Sc-DOTA-folate conjugate. J Nucl Med 54:2168-2174.
Muller C, Reber J, Schlup C, Leamon CP, Schibli R(2013b) In vitro and in vivo evaluation of an innocuous drug cocktail to improve the quality of folic acid targeted nuclear imaging in preclinical research. Mol Pharm 10:967-974.
Muller C, Struthers H, Winiger C, Zhernosekov K, Schibli R(2013c) DOTA conjugate with an albumin-binding entity enables the first folic acid-targeted 177Lu-radionuclide tumor therapy in mice. J Nucl Med 54:124-131.
Reber J, Haller S, Leamon CP, Muller C (2013) 177Lu-EC0800 combined with the antifolate pemetrexed: preclinical pilot study of folate receptor targeted radionuclide tumor therapy. Mol Cancer Ther 12:2436-2445.
     
2012
Betzel T, Müller C, Groehn V, Müller A, Reber J, Fischer CR, Krämer SD, Schibli R, Ametamey SM (2012) Radiosynthesis and Preclinical Evaluation of 3′-Aza-2′-[18F]fluorofolic Acid: A Novel PET Radiotracer for Folate Receptor Targeting. Bioconjugate Chemistry 24:205-214.
Reiner CS, Goetti R, Burger IA, Fischer MA, Frauenfelder T, Knuth A, Pfammatter T, Schaefer N, Alkadhi H (2012) Liver perfusion imaging in patients with primary and metastatic liver malignancy: prospective comparison between 99mTc-MAA spect and dynamic CT perfusion. Acad Radiol 19:613-621.